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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Maize-Genetic_map_IF
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 5
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Maize - Genetic_map_IF [ View Map Set Info ]
Map Name: 5
Map Start: 0 cM
Map Stop: 236 cM
Features by Type:
15 Marker
7 QTL
22 Total

Map Features

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Items 1 to 22 of 22.
Maize - Genetic_map_IF - 5
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
umc104b Marker 236 Maize - Genetic_map_C1 - 5 umc104b Marker 180.4 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C1old - 5 umc104b Marker 180 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C6 - 5 umc104b Marker 237.9 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C5 - 5 umc104b Marker 241.2 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IBM2 - 5 umc104b Marker 506.3 (cM) Automated name-based, Automated name-based View Maps
umc147a Marker 18 Maize - Genetic_map_C6 - 5 umc147a Marker 30.8 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C1old - 5 umc147a Marker 15 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_BM3 - 5 umc147a Marker 38.1 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C1 - 5 umc147a Marker 15.3 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C5 - 5 umc147a Marker 24.2 (cM) Automated name-based, Automated name-based View Maps
csu108a(gbp) Marker 54 Maize - Genetic_map_PF - 5 csu108a(gbp) Marker 13.4 (cM) Automated name-based, Automated name-based View Maps
umc43 Marker 84 Maize - Genetic_map_BM3 - 5 umc43 Marker 90.4 (cM) Automated name-based, Automated name-based View Maps
incw1 Marker 105 Maize - Genetic_map_YY22 - 5 incw1 Marker 168.2 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_IBM2 - 5 incw1 Marker 285.5 (cM) Automated name-based, Automated name-based View Maps
umc54 Marker 145 Maize - Genetic_map_C6 - 5 umc54 Marker 164.8 (cM) Automated name-based, Automated name-based View Maps
gsy258a(ant1) Marker 168 No other positions
umc63c Marker 231 Maize - Genetic_map_BM3 - 3 umc63c Marker 149.3 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_PF - 3 umc63c Marker 129.4 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C6 - 3 umc63c Marker 226.6 (cM) Automated name-based, Automated name-based View Maps
imcw1 Marker 105 No other positions
pgm2 Marker 36.86 Maize - Genetic_map_BM3 - 5 pgm2 Marker 57.1 (cM) Automated name-based, Automated name-based View Maps
mdh5 Marker 68 No other positions
bip1 Marker 95 No other positions
pal1 Marker 123 No other positions
umc39c Marker 151 No other positions
umc68a Marker 195 Maize - Genetic_map_C1old - 5 umc68a Marker 148 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C1 - 5 umc68a Marker 147.8 (cM) Automated name-based, Automated name-based View Maps
Maize - Genetic_map_C5 - 5 umc68a Marker 211.6 (cM) Automated name-based, Automated name-based View Maps
110 QTL 54 No other positions
112 QTL 105 - 123 No other positions
114 QTL 105 - 123 No other positions
116 QTL 151 - 168 No other positions
111 QTL 105 - 123 No other positions
113 QTL 105 - 123 No other positions
115 QTL 123 - 145 No other positions